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SRX19893802: Rhizosphere_fungi_Vicia cracca
1 ILLUMINA (Illumina NovaSeq 6000) run: 64,966 spots, 32.5M bases, 10Mb downloads

Design: DNA extraction of rhizosphere soil using Dneasy Powersoil Pro Kit (Qiagen). Amplification at Novogene (Cambridge, United Kingdom) of ITS2 region, with the forward primer, 5-GCATCGATGAAGAACGCAGC-3 and reverse primer 5-TCCTCCGCTTATTGATATGC-3.
Submitted by: University of Konstanz
Study: Fungal communities of annual and perennial plant species
show Abstracthide Abstract
In this two-phase greenhouse study on plant-soil feedbacks, we first examined fungal community development (ITS2-data) in rhizosphere soil of 18 annual and perennial forb species and, in the second phase, tested how the developed soil communities affected plant growth of all 18 plant species. We then linked these plant-soil feedback effects to variation in structural root traits among the different plant species, and tested whether differences in fungal pathogen accumulation explained observed differences in the strength of negative plant-soil feedbacks.
Sample: Rhizosphere_fungi_Vicia cracca
SAMN34098527 • SRS17247651 • All experiments • All runs
Library:
Name: S85
Instrument: Illumina NovaSeq 6000
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 64,966 spots, 32.5M bases, 10Mb
Run# of Spots# of BasesSizePublished
SRR2409336964,96632.5M10Mb2023-04-06

ID:
27264349

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