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DRX024380: Illumina MiSeq 2 x 300 paired-end sequencing of SAMD00023247
1 ILLUMINA (Illumina MiSeq) run: 320,039 spots, 192.7M bases, 110.9Mb downloads

Submitted by: (ASTELLAS)
Study: MiSeq analysis on the RT-PCR amplicon of HCV from human sera.
show Abstracthide Abstract
The study focused on the question of whether HCV/HIV coinfected hemophiliacs, who are suspected of being repeatedly exposed to unheated blood-related products, differ in the composition of hepatitis C viral quasispecies (genotypes and resistance mutations), from HCV monoinfected non-hemophiliacs with or without a history of whole blood transfusion. Twenty one clinical serum samples were included in this study for the analysis on the HCV core and NS3 protease region for genotyping and the NS3 protease region for naturally occurring resistance-associated variants, by Illumina MiSeq deep sequencing .
Sample: HCVHIV15
SAMD00023247 • DRS019347 • All experiments • All runs
Library:
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: VIRAL RNA
Selection: RT-PCR
Layout: PAIRED
Construction protocol: Illumina TruSeq Nano
Spot descriptor:
forward302  reverse

Runs: 1 run, 320,039 spots, 192.7M bases, 110.9Mb
Run# of Spots# of BasesSizePublished
DRR026785320,039192.7M110.9Mb2015-03-27

ID:
1412561

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