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SRX22451897: Targeted sequencing of Hypocalyptus sophoroides
1 ILLUMINA (Illumina HiSeq 3000) run: 406,071 spots, 121.8M bases, 45Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci
Submitted by: Mississippi State University
Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 5
PRJNA1022023 • SRP471007 • All experiments • All runs
show Abstracthide Abstract
Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.
Sample: Targeted sequencing of Hypocalyptus sophoroides
SAMN37579650 • SRS19465928 • All experiments • All runs
Organism: Hypocalyptus sophoroides
Library:
Name: 55e53a60-2084-4c05-ba73-f7e20ffa2ef9
Instrument: Illumina HiSeq 3000
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 406,071 spots, 121.8M bases, 45Mb
Run# of Spots# of BasesSizePublished
SRR26753090406,071121.8M45Mb2023-11-09

ID:
30437567

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