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SRX22458394: Targeted sequencing of Castanopsis borneensis
1 ILLUMINA (Illumina HiSeq 3000) run: 871,385 spots, 261.4M bases, 80.7Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci
Submitted by: Mississippi State University
Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 10
PRJNA1022032 • SRP471028 • All experiments • All runs
show Abstracthide Abstract
Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.
Sample: Targeted sequencing of Castanopsis borneensis
SAMN37585215 • SRS19472399 • All experiments • All runs
Organism: Castanopsis borneensis
Library:
Name: 4bd2fe0e-f5e2-45a2-a36f-a1e68203fd2b
Instrument: Illumina HiSeq 3000
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 871,385 spots, 261.4M bases, 80.7Mb
Run# of Spots# of BasesSizePublished
SRR26759963871,385261.4M80.7Mb2023-11-09

ID:
30444183

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