RNA-Seq of Homo sapiens cancer cell lines - SRA

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SRX22098643: RNA-Seq of Homo sapiens cancer cell lines
1 ILLUMINA (Illumina NovaSeq 6000) run: 38.8M spots, 7.8G bases, 2.3Gb downloads

Design: Total RNA with a RIN greater than 7.0 was isolated using TRIzol and used for RNA-seq library construction. Libraries were prepared with the TruSeq Stranded mRNA Sample Prep Kit, quantified using KAPA Library Quantification kits, and sequenced on an Illumina NovaSeq platform.

Submitted by: Seoul National University Cancer Research Institute

Study: Transcriptomic analysis of human gastric cancer cell lines following T-DXd treatment

PRJNA1028336 • SRP466477 • All experiments • All runs

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This study aims to evaluate the effect of trastuzumab deruxtecan (T-DXd) on human gastric cancer cell lines. NCI-N87 and SNU-484 cells were treated with 1 ug/ml of T-DXd and/or trastuzumab for 72 h and subjected to RNA-sequencing using an Illumina NovaSeq platform.

Sample: SNU-484 untreated1

SAMN37822456 • SRS19163538 • All experiments • All runs

Organism: Homo sapiens

Library:

Name: 484cont1

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RT-PCR

Layout: PAIRED

Runs: 1 run, 38.8M spots, 7.8G bases, 2.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR26392695	38,763,696	7.8G	2.3Gb	2023-10-16

ID:: 30030464

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