U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX22667308: WGS of Bacillus spp. from citrus
1 ILLUMINA (Illumina NovaSeq 6000) run: 2.8M spots, 697.4M bases, 287.4Mb downloads

Design: Library preparation and sequencing were performed by SeqCenter (Pittsburgh, Pennsylvania, USA). Sample libraries were prepared using the Illumina DNA Prep kit and IDT 10 bp unique dual indexing (UDI) indices, and sequenced on an Illumina NovaSeq 6000, producing 2x151 bp reads. Demultiplexing, quality control and adapter trimming was performed with bcl-convert (v4.0.3)
Submitted by: University of California, Riverside
Study: Bacillus spp. from the citrus microbiome under HLB disease pressure
show Abstracthide Abstract
Bacillus is a well-studied bacterial genus of Gram-positive and spore-forming bacteria, commonly soil-borne and plant-associated. Many Bacillus species produce a range of secondary metabolites and volatile organic compounds that are beneficial to plants through various mechanisms, such as pathogen suppression or plant growth promotion. Genome availability is the initial step in unlocking the beneficial metabolic potential of plant-associated Bacillus spp by enabling the identification of bioactive compound-producing gene clusters. Here we announce the draft genome assemblies of thirteen Bacillus spp isolated either from the root, leaf or stem tissue of citrus trees in areas of high (Florida) or low (California) Huanglongbing (HLB) disease pressure.
Sample:
SAMN38476160 • SRS19662899 • All experiments • All runs
Library:
Name: B9
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 2.8M spots, 697.4M bases, 287.4Mb
Run# of Spots# of BasesSizePublished
SRR269736672,847,234697.4M287.4Mb2023-12-01

ID:
30680166

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...