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SRX23741500: 16S rRNA gene seq of human fecal donor
1 ILLUMINA (Illumina MiSeq) run: 107,328 spots, 64.6M bases, 34.7Mb downloads

Design: Same design as in Kozich, et al. 2013, Applied Environmental Microbiology, except different 16S targeting sequences and linkers. Reads from standard Illumina sequencing primers, so that linkers + 16S rRNA primer sequences remain in Illumina reads (noted in forward and reverse primer field)
Submitted by: University of Utah School of Medicine
Study: Microbiota of ASD and neurotypical human and humanized-mouse fecal samples.
PRJNA952791 • SRP491755 • All experiments • All runs
show Abstracthide Abstract
This project contains fecal 16S rRNA gene reads from individuals with ASD and their neurotypical family members and 16S reads from male progeny of initially germ-free breeder pairs colonized with these microbiotas. It also contains the whole genome sequencing reads (Illumina and Oxford Nanopore Tech) and assembly for the Blautia sp. isolate JLR.GB024.
Sample: Donor_4018012_NT
SAMN40139190 • SRS20568273 • All experiments • All runs
Organism: gut metagenome
Library:
Name: 15784X91
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 107,328 spots, 64.6M bases, 34.7Mb
Run# of Spots# of BasesSizePublished
SRR28095247107,32864.6M34.7Mb2024-02-26

ID:
32031584

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