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SRX24538384: Tnseq of Xylella fastidiosa: almond
1 ILLUMINA (Illumina NovaSeq 6000) run: 83.8M spots, 6.3G bases, 1.8Gb downloads

Design: Transposon sequencing libraries based on specific amplification of Tn5 transposon
Submitted by: USDA-ARS
Study: Transposon sequencing of Xylella fastidiosa M23 in grapevine and almond
PRJNA1111135 • SRP507377 • All experiments • All runs
show Abstracthide Abstract
This study used transposon sequencing (Tnseq) to predict genes essential for Xylella fastidiosa growth in plants. Tn5 transposon mutant pools of Xylella fastidiosa M23 were inoculated into susceptible grapevines and almond plants, and re-isolated after ten weeks. These sequences are 3 replicates each of Tn5 mutant pools re-isolated from grapevine, almond, and from growth in rich culture medium (PD3).
Sample:
SAMN41384176 • SRS21283263 • All experiments • All runs
Organism: Xylella fastidiosa subsp. fastidiosa
Library:
Name: ATTR-7
Instrument: Illumina NovaSeq 6000
Strategy: Tn-Seq
Source: GENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 83.8M spots, 6.3G bases, 1.8Gb
Run# of Spots# of BasesSizePublished
SRR2901152683,849,8336.3G1.8Gb2024-05-13

ID:
32856242

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