SRA

Links from BioSample

SRX25164939: Other Sequencing of E. coli
1 ILLUMINA (Illumina MiSeq) run: 560,694 spots, 270.2M bases, 170.1Mb downloads

External Id: PNUSAE186911:wgs

Submitted by: PulseNet Next Generation Subtyping Methods Unit (Pulsenet)

Study: PulseNet Escherichia coli and Shigella genome sequencing

PulseNet STEC genome reference library

Sample: Escherichia coli

Library:

Name: Illumina DNA Prep

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina DNA Prep

Runs: 1 run, 560,694 spots, 270.2M bases, 170.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR29660972	560,694	270.2M	170.1Mb	2024-07-01

Supplemental Content

SRA Links for BioSample (Select 42187175) (1)
SRA
MAG: Cupriavidus sp. UBA2534 UBA2534_contig_683, whole genome shotgun sequence
MAG: Cupriavidus sp. UBA2534 UBA2534_contig_683, whole genome shotgun sequence
gi|2525065703|ref|NZ_DDMY01000002.1 |WGS:NZ_DDMY01|UBA2534_contig_683

Nucleotide
olfactory receptor family 2, partial [Vampyrum spectrum]
olfactory receptor family 2, partial [Vampyrum spectrum]
gi|1187837506|gb|ARM55342.1|

Protein
MAG: Candidatus Woesearchaeota archaeon isolate RIFCSPLOWO2_12_FULL_33_15, whole...
MAG: Candidatus Woesearchaeota archaeon isolate RIFCSPLOWO2_12_FULL_33_15, whole genome shotgun sequencing project
gi|2033635407|gb|JAGVZU000000000.1| U010000000

Nucleotide
Shiga-Toxigenic Escherichia coli
Shiga-Toxigenic Escherichia coli
Strains of ESCHERICHIA COLI with the ability to produce at least one or more of at least two antigenically distinct, usually bacteriophage-mediated cytotoxins: SHIGA TOXIN 1 a...<br/>Year introduced: 2008

MeSH

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