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SRX26059946: Nanopore sequencing of ARLN isolate
1 OXFORD_NANOPORE (GridION) run: 58,118 spots, 577.2M bases, 467.3Mb downloads

Design: Flow cell type: FLO-MIN114, Kit type: SQK-NBD114-96, Basecalling: Super-accurate basecalling, 400 bps, MinKNOW: 24.02.16, Bream: 7.9.8, Configuration: 5.9.18, Dorado: 7.3.11, MinKNOW Core: 5.9.12
Submitted by: Utah Public Health Laboratory Infectious Disease submission group (UPHL_ID)
Study: Assorted bacteria with public health implications
show Abstracthide Abstract
Bacteria with public health implications due to virulence or antimicrobial resistance. Many of these bacteria were associated with outbreaks or have abnormal characteristics. Unfortunately, we don't have time to write up why each of these bacterial isolates were sequenced, but we have created a bioproject where we can submit reads and assemblies. Please contact the authors for more information for isolates that require additional information.
Sample: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae
SAMN43586368 • SRS22629758 • All experiments • All runs
Library:
Name: 2024CK-3593430
Instrument: GridION
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 58,118 spots, 577.2M bases, 467.3Mb
Run# of Spots# of BasesSizePublished
SRR3063810558,118577.2M467.3Mb2024-09-13

ID:
35169452

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