U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX1526055: Genome sequencing of Ziziphus jujuba 'Xinjiangxiaoyuanzao' at 25× depth
2 ILLUMINA (Illumina HiSeq 2500) runs: 40.1M spots, 10G bases, 3.9Gb downloads

Design: Xinjiangxiaoyuanzao were re-sequenced at 25× depth
Submitted by: Northwest A&F University
Study: Ziziphus jujuba 'Junzao' genome sequencing and assembly
show Abstracthide Abstract
The jujube (Ziziphus jujuba Mill.) (2n=2x=24), native to China, is one of the oldest cultivated fruit tree with more than 7000 years of domestication and utilization history. Jujube is famous as “woody crop” and traditional herbal medicine, and has been the great potential fruit tree and introduced worldwide. Jujube cultivars have been traditionally classified into two major types according to the usage of their fruit, e.g., fresh and dry. The dried jujube accounted for approximately 80% of total production. Recently, the draft sequence of an excellent fresh-cultivar 'Dongzao' has been published, sequencing more genome of jujube will enable us understand the domestication progress, genome evolution and also provide strategies for improvements.'Junzao' is the most dominant jujube cultivar across China, which has reached ca. 35% of cultivation acreage and contributed to 50% of dried-jujube production. Our genomic sequencing provides insights into the variation and evolution of the jujube genome.
Sample: Young leaves of Ziziphus jujuba var. spinosa 'Xinjiangxiaoyuanzao'
SAMN04390232 • SRS1243967 • All experiments • All runs
Library:
Name: DSW01837
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Spot descriptor:
forward126  reverse

Runs: 2 runs, 40.1M spots, 10G bases, 3.9Gb
Run# of Spots# of BasesSizePublished
SRR30956842,951,088737.8M373.7Mb2016-10-24
SRR309568537,167,4219.3G3.6Gb2016-10-24

ID:
2155989

Supplemental Content