U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX1883226: Whole genome shotgun sequencing of FSIS1606926 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 594,408 spots, 291.9M bases, 181.2Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Salmonella
PRJNA292666 • SRP062916 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN05301301 • SRS1529635 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Heidelberg
Library:
Name: FSIS1606926 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS1606926.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 594,408 spots, 291.9M bases, 181.2Mb
Run# of Spots# of BasesSizePublished
SRR3726307594,408291.9M181.2Mb2016-06-28

ID:
2689957

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...