MDA of MALV cell LP-1 - SRA

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SRX2493817: MDA of MALV cell LP-1
1 ILLUMINA (Illumina MiSeq) run: 16.5M spots, 8.2G bases, 4.4Gb downloads

Design: Single MALV cell was isolated from sea water. Whole genome amplification via multiple-displacement amplification.

Submitted by: University of British Columbia

Study: Marine Alveolates from the North Pacific Ocean; raw sequence reads

PRJNA360948 • SRP096777 • All experiments • All runs

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To examine Marine Alveolate (MALV) genomes, in this study we generated single-cell genome surveys from seven individually isolated cells. MALVs are diverse and widespread early-branching dinoflagellates, but most knowledge of the group comes from a few cultured species that are generally not abundant in natural samples, or from diversity analyses of PCR-based environmental SSU rRNA gene sequences.

Sample:

SAMN06216992 • SRS1923036 • All experiments • All runs

Organism: Marine alveolate LP-1

Library:

Name: LP-1

Instrument: Illumina MiSeq

Strategy: WGA

Source: GENOMIC

Selection: MDA

Layout: PAIRED

Runs: 1 run, 16.5M spots, 8.2G bases, 4.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR5177630	16,490,104	8.2G	4.4Gb	2017-10-01

ID:: 3616182

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