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SRX2755507: Whole genome shotgun sequencing of FSIS1711020 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 869,385 spots, 425M bases, 253.1Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Salmonella
PRJNA292666 • SRP062916 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN06824381 • SRS2140628 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Muenchen
Library:
Name: FSIS1711020 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS1711020.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 869,385 spots, 425M bases, 253.1Mb
Run# of Spots# of BasesSizePublished
SRR5470927869,385425M253.1Mb2017-04-24

ID:
3974809

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