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SRX3440508: Whole genome shotgun sequencing of FSIS11705838 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 966,880 spots, 289.4M bases, 146Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Salmonella
PRJNA292666 • SRP062916 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN08127374 • SRS2731354 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Ohio
Library:
Name: FSIS11705838 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11705838.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 966,880 spots, 289.4M bases, 146Mb
Run# of Spots# of BasesSizePublished
SRR6342372966,880289.4M146Mb2017-12-04

ID:
4797390

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