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SRX4084667: GBS of Spinus atratus: wild caught
1 ILLUMINA (Illumina HiSeq 2500) run: 1.9M spots, 170.3M bases, 147.3Mb downloads

Design: Genotyping-by-sequencing approach following Parchman (2012) with size-selection window 500-600 base pairs. Pooled individual barcoded libraries sequenced on Illumina HiSeq 2500 with single 100 bp reads.
Submitted by: University of Montana
Study: Detecting introgression despite phylogenetic uncertainty: the case of the South American siskins
PRJNA471519 • SRP146082 • All experiments • All runs
show Abstracthide Abstract
Sequences were produced by following Parchman (2012) protocol for genotyping-by-sequencing using a size-selection window of 500-600 base pairs. Individual libraries were pooled and sequenced on a single-flow lane of Illumina HiSeq 2500 to produce 100 bp single end reads. Data includes 40 individually barcoded specimens of the avian passerine genus Spinus. Data was used to investigate evolutionary relationships and admixture history of closely related, sympatric bird species in the high Andes.
Sample:
SAMN09210867 • SRS3301724 • All experiments • All runs
Organism: Spinus atratus
Library:
Name: NK168348
Instrument: Illumina HiSeq 2500
Strategy: RAD-Seq
Source: GENOMIC
Selection: Reduced Representation
Layout: SINGLE
Runs: 1 run, 1.9M spots, 170.3M bases, 147.3Mb
Run# of Spots# of BasesSizePublished
SRR71667211,913,373170.3M147.3Mb2018-05-15

ID:
5570228

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