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SRX4221822: Whole genome shotgun sequencing of FSIS11810432 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 2M spots, 608.4M bases, 370.9Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Salmonella
PRJNA292666 • SRP062916 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN09430568 • SRS3422479 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Kentucky
Library:
Name: FSIS11810432 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11810432.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 2M spots, 608.4M bases, 370.9Mb
Run# of Spots# of BasesSizePublished
SRR73484412,034,785608.4M370.9Mb2018-06-15

ID:
5708809

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