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SRX19443793: GSM7051651: gut, control group, rep1; Pelodiscus sinensis; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 25.3M spots, 7.6G bases, 2.4Gb downloads

External Id: GSM7051651_r1
Submitted by: Hunan Fisheries Science Institute
Study: Environmentally relevant concentrations of niclosamide disrupt antioxidant defense, histology, and the liver and intestine transcriptome of Chinese soft-shelled turtle
PRJNA936854 • SRP423495 • All experiments • All runs
show Abstracthide Abstract
To investigate the cellular responses of the Chinese soft-shelled turtle after niclosamide exposure, a total of 45 healthy juvenile turtles randomly selected and divided into three groups containing one control group (without NIC exposure, CG) and two experimental groups (exposed to 10 and 50 µg/L of NIC, respectively). Overall design: The expression profiling analysis of turtle liver and gut for after niclosmaide exposure
Sample: gut, control group, rep1
SAMN33380756 • SRS16836985 • All experiments • All runs
Organism: Pelodiscus sinensis
Library:
Name: GSM7051651
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was extracted using the TRIzol reagent (Invitrogen, CA, USA) according to the manufacturer's protocol. RNA purity and quantification were evaluated using the NanoDrop 2000 spectrophotometer (Thermo Scientific, USA). RNA integrity was assessed using the Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA). Then the libraries were constructed using VAHTS Universal V6 RNA-seq Library Prep Kit according to the manufacturer's instructions
Runs: 1 run, 25.3M spots, 7.6G bases, 2.4Gb
Run# of Spots# of BasesSizePublished
SRR2355662825,294,7857.6G2.4Gb2024-01-01

ID:
26718209

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