U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX351440: 32_APP/PS1/IL10het_M
1 ILLUMINA (Illumina HiSeq 2000) run: 70.5M spots, 3.5G bases, 2.2Gb downloads

Design: Total RNA was purified from quarter brain whole tissue using Trizol (Invitrogen) and RNeasy columns (Qiagen). Strand-specific libraries were generated with 1 μg RNA input using the TruSeq Stranded mRNA Sample Prep Kit (Illumina) using the low throughput protocol. This includes poly(a) enrichment with oligo dT beads as the first step. Libraries were multiplexed in a pool of 3 using Illumina indexes. Libraries are numbered according to animal number.
Submitted by: UNIVERSITY OF SOUTHERN CALIFORNIA
Study: Whole brain transcriptional changes in the APPswe/PS1dE9 mouse model of Alzheimer’s disease resulting from IL-10 deficiency
show Abstracthide Abstract
While neuroinflammation is a widely accepted participant in Alzheimer''s disease pathology, the impact of inflammatory suppressor pathways are poorly understood. To determine whether deficiency in the anti-inflammatory cytokine IL-10 impacted AD-like pathology, IL-10 was genetically removed from the APP/PS1 mouse model of cerebral amyloidosis. To assess the global transcriptional changes in the brains of APP/PS1 mice deficient in IL-10, RNAseq of poly(A) enriched transcripts was performed. Total brain mRNA was isolated from 12 months old APP/PS1: IL-10+/+, IL-10+/-, IL-10-/- animals (5 per group). This analysis revealed modulation of select innate immune genes that drive AD-like neuroinflammation.
Sample: 32_APP/PS1/IL10+/-_M
SAMN02356400 • SRS480634 • All experiments • All runs
Organism: Mus musculus
Library:
Name: 32
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Spot descriptor:
forward

Runs: 1 run, 70.5M spots, 3.5G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR98733170,474,2923.5G2.2Gb2014-09-11

ID:
498525

Supplemental Content

Search details

See more...

Recent activity