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SRX20164407: Whole-genome sequencing of Enterococcus from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 1.6M spots, 879.2M bases, 495.9Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN34488843 • SRS17486072 • All experiments • All runs
Organism: Enterococcus faecium
Library:
Name: BWH_1134_E_faem
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.6M spots, 879.2M bases, 495.9Mb
Run# of Spots# of BasesSizePublished
SRR243760381,553,617879.2M495.9Mb2023-05-01

ID:
27581220

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