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ERX4553781: Illumina MiSeq paired end sequencing; EXP-9-1-2020-09-26_14-43-13
1 ILLUMINA (Illumina MiSeq) run: 1.3M spots, 567M bases, 315.4Mb downloads

Submitted by: University Hospital Muenster
Study: Donor-derived vancomycin-resistant enterococci transmission and bloodstream infection after intestinal transplantation
show Abstracthide Abstract
We present data from a case of VRE transmission following intestinal transplantation. The recipient, not previously colonized with VRE, developed VRE abdominal and bloodstream infections after transplantation. VRE was also detected in the allograft perfusion fluid collected prior to transplantation. All isolated VRE strains were analyzed employing whole genome sequencing techniques. This analysis showed a very close genetic relatedness between all strains, thus allowing the reconstruction of the VRE transmission. The colonized intestinal allograft was identified as the source of the VRE infections developed by the recipient, who had tested negative for VRE colonization in a pre-transplant screening.
Sample: 17198
SAMEA7340609 • ERS5099114 • All experiments • All runs
Library:
Name: unspecified
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward251  reverse

Runs: 1 run, 1.3M spots, 567M bases, 315.4Mb
Run# of Spots# of BasesSizePublished
ERR46266441,289,266567M315.4Mb2020-11-03

ID:
12313903

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