Illumina HiSeq 2000 paired end sequencing - SRA

ERX1627978: Illumina HiSeq 2000 paired end sequencing
1 ILLUMINA (Illumina HiSeq 2000) run: 902,284 spots, 225.6M bases, 72Mb downloads

Design: Illumina sequencing of library 16552602, constructed from sample accession ERS1080815 for study accession ERP014470. This is part of an Illumina multiplexed sequencing run (19789_7). This submission includes reads tagged with the sequence GATCAGCGTATAGCCT.

Submitted by: SC (The Wellcome Trust Sanger Institute)

Study: WTTGseq

PRJEB12937 • ERP014470 • All experiments • All runs

show Abstracthide Abstract

The study is to investigate the hypothesis that WGS will determine the origin of VREfm in a cohort of hospitalised patients. Specifically to determine whether VREfm is solely acquired through nosocomial transmission, or if a proportion can be attributed to gut flora already present at initial presentation.

Sample: 19789_7#9

SAMEA3893681 • ERS1080815 • All experiments • All runs

Organism: Enterococcus faecium

Library:

Name: 16552602

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Standard

Runs: 1 run, 902,284 spots, 225.6M bases, 72Mb

Run	# of Spots	# of Bases	Size	Published
ERR1557222	902,284	225.6M	72Mb	2016-08-05

ID:: 2884307

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity