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SRX1728057: Acinetobacter sp. UNC436CL71CviS28
1 ILLUMINA (Illumina HiSeq 2500) run: 21.4M spots, 3.2G bases, 2Gb downloads

External Id: JGI-SRA-8771
Submitted by: DOE Joint Genome Institute (JGI)
Study: Acinetobacter sp. UNC436CL71CviS28 Genome sequencing and assembly
show Abstracthide Abstract
This is a reference bacterial genome from a study to characterize how plant host genes affect the microbiome community assemblage and how the microbiome influences plant phenotypes, such as drought or salt tolerance, nutrient use, productivity, pathogen resistance, and yield. Plant-associated metagenomes are being characterized by 16S ribotyping, metagenome and reference genome sequencing and metatranscriptome sequencing. Experimental systems used to characterize the interplay between host and associated communities in different plant types have been chosen to be relevant to energy and environmental concerns, for example, Arabidopsis as a model, corn, and a key biofuel crop (Miscanthus).
Sample:
SAMN02743943 • SRS1412847 • All experiments • All runs
Library:
Name: OGOW
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol: Regular (DNA)
Runs: 1 run, 21.4M spots, 3.2G bases, 2Gb
Run# of Spots# of BasesSizePublished
SRR344182421,369,0443.2G2Gb2016-05-01

ID:
2472504

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