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SRX3572090: Mapped reads for uncultivated Aminobacterium bacterium UBA10554 genome recovered from SRX691272
1 ILLUMINA (Illumina HiSeq 2000) run: 64,689 spots, 10.9M bases, 6.1Mb downloads

Design: Reads from SRX691272 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10554 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Aminobacterium bacterium UBA10554 genome recovered from SRX691272
SAMN08019689 • SRS2843061 • All experiments • All runs
Library:
Name: UBA10554_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 64,689 spots, 10.9M bases, 6.1Mb
Run# of Spots# of BasesSizePublished
SRR648237464,68910.9M6.1Mb2018-03-05

ID:
4957592

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