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SRX3578166: Mapped reads for uncultivated Methylococcaceae bacterium UBA12269 genome recovered from SRX1122679
1 ILLUMINA (Illumina HiSeq 2000) run: 571,899 spots, 108.2M bases, 27.7Mb downloads

Design: Reads from SRX1122679 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA12269 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Methylococcaceae bacterium UBA12269 genome recovered from SRX1122679
SAMN08018511 • SRS2847896 • All experiments • All runs
Library:
Name: UBA12269_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 571,899 spots, 108.2M bases, 27.7Mb
Run# of Spots# of BasesSizePublished
SRR6488119571,899108.2M27.7Mb2018-02-23

ID:
4963668

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