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SRX3576384: Mapped reads for uncultivated Methylococcaceae bacterium UBA9142 genome recovered from ERX556059
1 ILLUMINA (Illumina HiSeq 2000) run: 98,978 spots, 19.1M bases, 9.3Mb downloads

Design: Reads from ERX556059 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9142 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Methylococcaceae bacterium UBA9142 genome recovered from ERX556059
SAMN08017697 • SRS2846266 • All experiments • All runs
Library:
Name: UBA9142_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 98,978 spots, 19.1M bases, 9.3Mb
Run# of Spots# of BasesSizePublished
SRR648651398,97819.1M9.3Mb2018-02-23

ID:
4961886

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