Mapped reads for uncultivated Thermotogae bacterium UBA12178 genome r... - SRA

SRX3577438: Mapped reads for uncultivated Thermotogae bacterium UBA12178 genome recovered from SRX1134172
1 ILLUMINA (Illumina MiSeq) run: 109,881 spots, 51.2M bases, 19.7Mb downloads

Design: Reads from SRX1134172 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA12178 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Thermotogae bacterium UBA12178 genome recovered from SRX1134172

SAMN08019497 • SRS2847165 • All experiments • All runs

Organism: Thermotogota bacterium

Library:

Name: UBA12178_library

Instrument: Illumina MiSeq

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 109,881 spots, 51.2M bases, 19.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR6487337	109,881	51.2M	19.7Mb	2018-02-23

ID:: 4962940

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Sequence Read Archive

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