Nanopore DNA sequencing of yeast strain DGY1736 - SRA

SRX15493680: Nanopore DNA sequencing of yeast strain DGY1736
1 OXFORD_NANOPORE (MinION) run: 40,245 spots, 196.5M bases, 171.2Mb downloads

Design: Adapters added by ligation sequencing (SQK-LSK110)

Submitted by: New York University

Study: ONT MinION Sequencing of Large-Scale Inverted Duplications

PRJNA591579 • SRP233012 • All experiments • All runs

show Abstracthide Abstract

Evolved yeast strains (FY4 ancestor) with previously identified CNVs (10.1371/journal.pbio.3000069) were sequenced using Oxford-Nanopore Technologie's MinION sequencing platform. These CNVs are the result of the DNA replication based mechanism ODIRA (origin dependent inverted repeat amplification) and are large-scale inverted repeats.

Sample:

SAMN28728552 • SRS13208794 • All experiments • All runs

Organism: Saccharomyces cerevisiae

Library:

Name: 10

Instrument: MinION

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 40,245 spots, 196.5M bases, 171.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR19440501	40,245	196.5M	171.2Mb	2022-05-28

ID:: 22073890

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity