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Report for CCDS31783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31783.1 Public Homo sapiens 12 ARID2 24 110 108 CCDS HistoryNCBI Gene:196528Re-query CCDS DB by CCDS ID:31783.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31783.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334344.11 ENSP00000335044.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334344.11Link to Ensembl Protein Viewer:ENSP00000335044.6Re-query CCDS DB by Nucleotide ID:ENST00000334344Re-query CCDS DB by Protein ID:ENSP00000335044
Original member Current member NCBI NM_152641.4 NP_689854.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152641.4Link to Protein Sequence:NP_689854.2Re-query CCDS DB by Nucleotide ID:NM_152641Re-query CCDS DB by Protein ID:NP_689854Link to BLAST:NP_689854.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689854.2 1835 Q68CP9-1 1835 100% 0 0

Chromosomal Locations for CCDS 31783.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 45729837 45729928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45730044 45730137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45731217 45731314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45811418 45811551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45817670 45817888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45821420 45821487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45836589 45836655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45836741 45836991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45837321 45837417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45837498 45837707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45839329 45839496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45846856 45846937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45848836 45848970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45849580 45849776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45850036 45852896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45860801 45860949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45891780 45891918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45892011 45892096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45893420 45893543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45893630 45893721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45904934 45905078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5508 nt):
ATGGCAAACTCGACGGGGAAGGCGCCTCCGGACGAGCGGAGAAAGGGACTCGCTTTCCTGGACGAGCTGC
GGCAGTTCCACCACAGCAGAGGGTCGCCTTTTAAAAAAATCCCTGCGGTGGGTGGGAAGGAGCTGGATCT
TCACGGTCTCTACACCAGAGTCACTACTTTAGGCGGATTCGCGAAGGTTTCTGAGAAGAATCAGTGGGGA
GAAATTGTTGAAGAGTTCAACTTTCCCAGAAGTTGTTCTAACGCTGCCTTTGCTTTAAAACAGTATTACT
TGCGTTACCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAGGATGATGATGAGGTACCACCAGGCAA
TCCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTACCAGCAACACAGTGTGTCGGAT
TATCTGCGTCAAAGTTATGGGCTGTCCATGGACTTTAATTCGCCAAATGATTATAATAAATTGGTGCTTT
CACTGTTATCTGGACTCCCAAATGAAGTGGACTTTGCTATTAACGTATGCACTCTCCTATCAAATGAAAG
CAAGCACGTCATGCAACTTGAAAAAGATCCTAAAATCATCACTTTACTACTTGCTAATGCCGGGGTGTTT
GACGACACTTTAGGATCCTTTTCCACTGTATTTGGAGAAGAATGGAAAGAGAAGACTGATAGAGACTTCG
TTAAGTTTTGGAAAGACATCGTTGATGATAATGAAGTTCGTGACCTCATTTCTGACAGAAACAAGTCTCA
TGAAGGTACATCAGGAGAATGGATTTGGGAGTCTTTATTTCATCCACCTCGAAAGCTGGGCATTAACGAT
ATTGAAGGACAGCGGGTACTTCAGATTGCAGTGATTTTGAGAAATCTTTCCTTTGAGGAGGGCAATGTTA
AGCTCTTGGCAGCTAATCGTACCTGTCTTCGTTTCCTATTACTTTCTGCACATAGTCATTTTATTTCTTT
AAGGCAATTAGGCCTTGACACATTAGGAAATATTGCAGCTGAGCTTTTACTGGACCCTGTTGATTTCAAA
ACTACTCATCTGATGTTTCATACTGTTACAAAATGTCTAATGTCAAGGGATAGATTTTTAAAGATGAGAG
GCATGGAAATTTTGGGAAATCTTTGCAAAGCAGAAGATAATGGTGTTTTAATTTGTGAATATGTGGATCA
GGATTCCTACAGAGAGATCATTTGTCATCTCACTTTACCTGATGTGCTGCTTGTAATCTCAACACTCGAG
GTGCTATACATGCTCACGGAAATGGGAGATGTTGCTTGCACAAAAATTGCAAAAGTAGAAAAGAGCATAG
ACATGTTAGTGTGTCTGGTTTCTATGGATATTCAGATGTTTGGCCCTGATGCACTAGCTGCGGTAAAACT
CATTGAACACCCAAGTTCCAGTCATCAAATGTTATCTGAAATTAGGCCACAAGCTATAGAGCAAGTCCAA
ACCCAGACTCATGTAGCATCTGCCCCAGCTTCCAGAGCAGTTGTAGCGCAGCATGTTGCTCCACCTCCAG
GAATAGTGGAAATAGATAGTGAGAAGTTTGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAGA
TTGTTCTGTTTCTCGAGCAGAAATGTATTCTGAATACCTCTCGACTTGCAGTAAATTAGCTCGTGGTGGA
ATCCTAACATCAACTGGATTTTATAAATGTCTTAGAACGGTCTTTCCAAATCATACAGTGAAGAGAGTGG
AGGATTCCAGTAGCAATGGGCAGGCACATATTCATGTGGTAGGAGTAAAACGGAGGGCTATACCACTTCC
CATTCAGATGTACTATCAGCAGCAACCAGTTTCTACTTCTGTTGTTCGTGTTGATTCTGTTCCTGATGTA
TCTCCTGCTCCTTCACCTGCAGGAATCCCTCATGGATCACAAACCATAGGAAACCATTTTCAGAGGACTC
CTGTTGCCAACCAATCTTCAAATCTGACTGCAACACAAATGTCTTTTCCTGTACAAGGTGTTCATACTGT
GGCACAAACTGTTTCAAGAATTCCACAAAATCCTTCACCTCATACCCACCAGCAACAAAATGCTCCAGTG
ACTGTCATTCAAAGTAAAGCTCCAATTCCTTGTGAAGTTGTTAAGGCTACAGTTATCCAGAATTCCATAC
CCCAGACAGGAGTTCCTGTTAGTATTGCTGTTGGAGGAGGACCTCCACAGAGTTCTGTTGTTCAGAATCA
TAGTACAGGGCCACAACCTGTTACAGTTGTGAATTCTCAGACATTGCTTCACCATCCATCTGTAATTCCA
CAGCAGTCTCCATTACACACAGTGGTACCAGGACAGATCCCTTCAGGCACTCCTGTTACAGTAATTCAAC
AAGCTGTCCCACAGAGTCATATGTTTGGCAGAGTACAGAACATACCAGCATGTACTTCTACAGTTTCACA
GGGTCAACAGTTAATCACCACATCACCCCAACCTGTGCAAACTTCATCTCAACAGACATCAGCTGGTAGC
CAGTCACAAGATACTGTTATCATAGCACCCCCACAGTATGTAACAACTTCTGCATCCAATATTGTCTCAG
CAACTTCAGTACAGAATTTTCAGGTAGCTACAGGACAAATGGTTACTATTGCTGGTGTCCCAAGTCCACA
AGCCTCAAGGGTAGGGTTTCAGAACATTGCACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTACAGTG
GTACAGCAGCCTATTCAACAACCACAGCAGCCAACCCAACAAAGCGTAGTGATTGTAAGCCAGCCAGCTC
AACAAGGTCAAACTTATGCACCAGCCATTCACCAAATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTGG
TCAGACAGTTCAGCTAACTGGACAACCTAACATAACTCCATCTTCTTCACCATCACCTGTCCCAGCTACT
AATAACCAAGTCCCTACTGCCATGTCGTCGTCCTCTACCCCTCAATCACAGGGACCACCTCCTACTGTCA
GTCAAATGTTATCTGTGAAAAGGCAGCAACAGCAGCAACATTCACCAGCACCCCCACCACAGCAGGTACA
AGTACAAGTTCAGCAGCCCCAACAAGTACAGATGCAAGTTCAACCTCAACAGTCGAATGCAGGAGTTGGT
CAGCCTGCCTCTGGTGAGTCGAGTCTGATTAAACAGCTTCTGCTTCCGAAACGTGGTCCTTCAACACCAG
GTGGTAAGCTTATTCTCCCAGCTCCACAGATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCTCAGGT
GGTCTATCAGGTGGCCAGTAACCAAGCCGCAGGTTTTGGAGTGCAGGGGCAAACTCCAGCTCAGCAGCTA
TTGGTTGGGCAGCAAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCCTCAGGGGGAGTACAAACTGTGC
CCATTTCGAACTTACAAATATTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGAC
TTCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGA
AATGCAACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGCGGAACGCAGACAGGAGTTGGACTTCCAG
TACAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGGACAATCATCATGTACTACTGCTACTCCCCCATT
CAAAGGTGATAAAATAATTTGCCAAAAGGAGGAGGAAGCAAAGGAAGCAACAGGTTTACATGTTCATGAA
CGTAAAATTGAAGTCATGGAGAACCCGTCCTGCCGACGAGGAGCCACAAACACCAGCAATGGGGATACAA
AGGAAAATGAAATGCATGTGGGAAGTCTTTTAAATGGGAGAAAGTACAGTGACTCAAGTCTACCTCCTTC
AAACTCAGGGAAAATTCAAAGTGAGACTAATCAGTGCTCACTAATCAGTAATGGGCCATCATTGGAATTA
GGTGAGAATGGAGCATCTGGGAAACAGAACTCAGAACAAATAGACATGCAAGATATCAAAAGTGATTTGA
GAAAACCGCTAGTTAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTCC
AAATCATAAAACTTCCAATCATGTAGGAAATGGTGAGATATCTCCAATGGAACCACAAGGGACTTTAGAT
ATCACTCAGCAAGATACTGCCAAAGGTGATCAACTAGAAAGAATTTCTAATGGACCTGTATTAACTTTGG
GTGGTTCATCTGTGAGCAGTATACAGGAGGCTTCAAATGCGGCAACACAGCAATTTAGTGGTACTGATTT
GCTTAATGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCA
CCACATTCTACAACCTCTGTTATACAGGGACATCAAATCATAGCAGTTCCCGACTCAGGATCAAAAGTAT
CCCATTCTCCTGCCCTATCATCTGACGTTCGGTCTACAAATGGCACAGCAGAATGCAAAACTGTAAAGAG
GCCAGCAGAGGATACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAAGTAGGAGTTAGAATTGTTACA
ATCAGTGACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGCA
CTGTAGCTAAAGTAGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCATCCACCAACATATGTACAGAA
TGTGGTCCCGCAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAGTTCT
CAGCCTTCTCCATTCAGTGGATCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGACAGAACTTCATGT
GTCTGTGGCAGTCTTGTAAAAAGTGGTTTCAGACACCCTCACAGGTTTTCTACCATGCAGCAACTGAACA
TGGAGGAAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGGTTGTGAGCCTTTTCAGCGACAGCGGTTT
TCTTTTATTACCCACTTGCAGGATAAGCACTGTTCAAAGGATGCCCTACTTGCAGGATTAAAACAAGATG
AACCAGGACAAGCAGGAAGTCAGAAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACAAGCTCAACTCC
TAGAGCACAAAAGGCCATTGTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGGAGAGGATCAAGAAAC
CTTGTCTTTCGAGATTTTACAGATGAAAAAGAGGGACCAATAACTAAACACATCCGACTAACAGCTGCCT
TAATATTAAAAAATATTGGTAAATATTCAGAATGTGGTCGCAGATTGTTAAAGAGACATGAAAATAACTT
ATCAGTGCTAGCCATTAGTAACATGGAAGCTTCCTCCACCCTTGCCAAATGCCTTTATGAACTTAATTTT
ACAGTTCAGAGTAAGGAACAAGAAAAAGACTCAGAAATGCTGCAGTGA

Translation (1835 aa):
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWG
EIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPSSYNYQQHSVSD
YLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVF
DDTLGSFSTVFGEEWKEKTDRDFVKFWKDIVDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGIND
IEGQRVLQIAVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFK
TTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSEIRPQAIEQVQ
TQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGG
ILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDV
SPAPSPAGIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPV
TVIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIP
QQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTV
VQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPAT
NNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQSNAGVG
QPASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQL
LVGQQNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQG
NATQLIAPAGITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCSLISNGPSLEL
GENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPMEPQGTLD
ITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVS
PHSTTSVIQGHQIIAVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVT
ISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSS
QPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRN
LVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNF
TVQSKEQEKDSEMLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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