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Report for CCDS31783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31783.1 Public Homo sapiens 12 ARID2 24 110 108 CCDS HistoryNCBI Gene:196528Re-query CCDS DB by CCDS ID:31783.1Re-query CCDS DB by GeneID:196528See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31783.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334344.11 ENSP00000335044.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334344.11Link to Ensembl Protein Viewer:ENSP00000335044.6Re-query CCDS DB by Nucleotide ID:ENST00000334344Re-query CCDS DB by Protein ID:ENSP00000335044
Original member Current member NCBI NM_152641.4 NP_689854.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152641.4Link to Protein Sequence:NP_689854.2Re-query CCDS DB by Nucleotide ID:NM_152641Re-query CCDS DB by Protein ID:NP_689854Link to BLAST:NP_689854.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689854.2 1835 Q68CP9-1 1835 100% 0 0

Chromosomal Locations for CCDS 31783.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 45729837 45729928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45730044 45730137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45731217 45731314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45811418 45811551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45817670 45817888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45821420 45821487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45836589 45836655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45836741 45836991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45837321 45837417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45837498 45837707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45839329 45839496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45846856 45846937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45848836 45848970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45849580 45849776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45850036 45852896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45860801 45860949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45891780 45891918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45892011 45892096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45893420 45893543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45893630 45893721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 45904934 45905078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5508 nt):
ATGGCAAACTCGACGGGGAAGGCGCCTCCGGACGAGCGGAGAAAGGGACTCGCTTTCCTGGACGAGCTGC
GG
CAGTTCCACCACAGCAGAGGGTCGCCTTTTAAAAAAATCCCTGCGGTGGGTGGGAAGGAGCTGGATCT
T
CACGGTCTCTACACCAGAGTCACTACTTTAGGCGGATTCGCGAAGGTTTCTGAGAAGAATCAGTGGGGA
GAA
ATTGTTGAAGAGTTCAACTTTCCCAGAAGTTGTTCTAACGCTGCCTTTGCTTTAAAACAGTATTACT
TG
CGTTACCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAGGATGATGATGAGGTACCACCAGGCAA
T
CCAAAGCCACAGCTTCCTATTGGTGCAATTCCATCTTCCTACAATTACCAGCAACACAGTGTGTCGGAT
TAT
CTGCGTCAAAGTTATGGGCTGTCCATGGACTTTAATTCGCCAAATGATTATAATAAATTGGTGCTTT
CA
CTGTTATCTGGACTCCCAAATGAAGTGGACTTTGCTATTAACGTATGCACTCTCCTATCAAATGAAAG
C
AAGCACGTCATGCAACTTGAAAAAGATCCTAAAATCATCACTTTACTACTTGCTAATGCCGGGGTGTTT
GAC
GACACTTTAGGATCCTTTTCCACTGTATTTGGAGAAGAATGGAAAGAGAAGACTGATAGAGACTTCG
TT
AAGTTTTGGAAAGACATCGTTGATGATAATGAAGTTCGTGACCTCATTTCTGACAGAAACAAGTCTCA
T
GAAGGTACATCAGGAGAATGGATTTGGGAGTCTTTATTTCATCCACCTCGAAAGCTGGGCATTAACGAT
ATT
GAAGGACAGCGGGTACTTCAGATTGCAGTGATTTTGAGAAATCTTTCCTTTGAGGAGGGCAATGTTA
AG
CTCTTGGCAGCTAATCGTACCTGTCTTCGTTTCCTATTACTTTCTGCACATAGTCATTTTATTTCTTT
A
AGGCAATTAGGCCTTGACACATTAGGAAATATTGCAGCTGAGCTTTTACTGGACCCTGTTGATTTCAAA
ACT
ACTCATCTGATGTTTCATACTGTTACAAAATGTCTAATGTCAAGGGATAGATTTTTAAAGATGAGAG
GC
ATGGAAATTTTGGGAAATCTTTGCAAAGCAGAAGATAATGGTGTTTTAATTTGTGAATATGTGGATCA
G
GATTCCTACAGAGAGATCATTTGTCATCTCACTTTACCTGATGTGCTGCTTGTAATCTCAACACTCGAG
GTG
CTATACATGCTCACGGAAATGGGAGATGTTGCTTGCACAAAAATTGCAAAAGTAGAAAAGAGCATAG
AC
ATGTTAGTGTGTCTGGTTTCTATGGATATTCAGATGTTTGGCCCTGATGCACTAGCTGCGGTAAAACT
C
ATTGAACACCCAAGTTCCAGTCATCAAATGTTATCTGAAATTAGGCCACAAGCTATAGAGCAAGTCCAA
ACC
CAGACTCATGTAGCATCTGCCCCAGCTTCCAGAGCAGTTGTAGCGCAGCATGTTGCTCCACCTCCAG
GA
ATAGTGGAAATAGATAGTGAGAAGTTTGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAGA
T
TGTTCTGTTTCTCGAGCAGAAATGTATTCTGAATACCTCTCGACTTGCAGTAAATTAGCTCGTGGTGGA
ATC
CTAACATCAACTGGATTTTATAAATGTCTTAGAACGGTCTTTCCAAATCATACAGTGAAGAGAGTGG
AG
GATTCCAGTAGCAATGGGCAGGCACATATTCATGTGGTAGGAGTAAAACGGAGGGCTATACCACTTCC
C
ATTCAGATGTACTATCAGCAGCAACCAGTTTCTACTTCTGTTGTTCGTGTTGATTCTGTTCCTGATGTA
TCT
CCTGCTCCTTCACCTGCAGGAATCCCTCATGGATCACAAACCATAGGAAACCATTTTCAGAGGACTC
CT
GTTGCCAACCAATCTTCAAATCTGACTGCAACACAAATGTCTTTTCCTGTACAAGGTGTTCATACTGT
G
GCACAAACTGTTTCAAGAATTCCACAAAATCCTTCACCTCATACCCACCAGCAACAAAATGCTCCAGTG
ACT
GTCATTCAAAGTAAAGCTCCAATTCCTTGTGAAGTTGTTAAGGCTACAGTTATCCAGAATTCCATAC
CC
CAGACAGGAGTTCCTGTTAGTATTGCTGTTGGAGGAGGACCTCCACAGAGTTCTGTTGTTCAGAATCA
T
AGTACAGGGCCACAACCTGTTACAGTTGTGAATTCTCAGACATTGCTTCACCATCCATCTGTAATTCCA
CAG
CAGTCTCCATTACACACAGTGGTACCAGGACAGATCCCTTCAGGCACTCCTGTTACAGTAATTCAAC
AA
GCTGTCCCACAGAGTCATATGTTTGGCAGAGTACAGAACATACCAGCATGTACTTCTACAGTTTCACA
G
GGTCAACAGTTAATCACCACATCACCCCAACCTGTGCAAACTTCATCTCAACAGACATCAGCTGGTAGC
CAG
TCACAAGATACTGTTATCATAGCACCCCCACAGTATGTAACAACTTCTGCATCCAATATTGTCTCAG
CA
ACTTCAGTACAGAATTTTCAGGTAGCTACAGGACAAATGGTTACTATTGCTGGTGTCCCAAGTCCACA
A
GCCTCAAGGGTAGGGTTTCAGAACATTGCACCAAAACCTCTCCCTTCTCAGCAAGTTTCATCTACAGTG
GTA
CAGCAGCCTATTCAACAACCACAGCAGCCAACCCAACAAAGCGTAGTGATTGTAAGCCAGCCAGCTC
AA
CAAGGTCAAACTTATGCACCAGCCATTCACCAAATTGTTCTTGCTAATCCAGCAGCTCTTCCAGCTGG
T
CAGACAGTTCAGCTAACTGGACAACCTAACATAACTCCATCTTCTTCACCATCACCTGTCCCAGCTACT
AAT
AACCAAGTCCCTACTGCCATGTCGTCGTCCTCTACCCCTCAATCACAGGGACCACCTCCTACTGTCA
GT
CAAATGTTATCTGTGAAAAGGCAGCAACAGCAGCAACATTCACCAGCACCCCCACCACAGCAGGTACA
A
GTACAAGTTCAGCAGCCCCAACAAGTACAGATGCAAGTTCAACCTCAACAGTCGAATGCAGGAGTTGGT
CAG
CCTGCCTCTGGTGAGTCGAGTCTGATTAAACAGCTTCTGCTTCCGAAACGTGGTCCTTCAACACCAG
GT
GGTAAGCTTATTCTCCCAGCTCCACAGATTCCTCCCCCTAATAATGCAAGAGCTCCTAGCCCTCAGGT
G
GTCTATCAGGTGGCCAGTAACCAAGCCGCAGGTTTTGGAGTGCAGGGGCAAACTCCAGCTCAGCAGCTA
TTG
GTTGGGCAGCAAAATGTTCAGTTGGTCCCAAGTGCAATGCCACCCTCAGGGGGAGTACAAACTGTGC
CC
ATTTCGAACTTACAAATATTGCCAGGTCCACTGATCTCAAATAGCCCAGCAACCATTTTCCAAGGGAC
T
TCTGGCAACCAGGTAACCATAACAGTTGTGCCAAATACGAGTTTTGCACCTGCAACTGTGAGTCAGGGA
AAT
GCAACTCAGCTCATTGCTCCAGCAGGAATTACCATGAGCGGAACGCAGACAGGAGTTGGACTTCCAG
TA
CAAACGCTTCCAGCCACTCAAGCATCTCCTGCTGGACAATCATCATGTACTACTGCTACTCCCCCATT
C
AAAGGTGATAAAATAATTTGCCAAAAGGAGGAGGAAGCAAAGGAAGCAACAGGTTTACATGTTCATGAA
CGT
AAAATTGAAGTCATGGAGAACCCGTCCTGCCGACGAGGAGCCACAAACACCAGCAATGGGGATACAA
AG
GAAAATGAAATGCATGTGGGAAGTCTTTTAAATGGGAGAAAGTACAGTGACTCAAGTCTACCTCCTTC
A
AACTCAGGGAAAATTCAAAGTGAGACTAATCAGTGCTCACTAATCAGTAATGGGCCATCATTGGAATTA
GGT
GAGAATGGAGCATCTGGGAAACAGAACTCAGAACAAATAGACATGCAAGATATCAAAAGTGATTTGA
GA
AAACCGCTAGTTAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTCC
A
AATCATAAAACTTCCAATCATGTAGGAAATGGTGAGATATCTCCAATGGAACCACAAGGGACTTTAGAT
ATC
ACTCAGCAAGATACTGCCAAAGGTGATCAACTAGAAAGAATTTCTAATGGACCTGTATTAACTTTGG
GT
GGTTCATCTGTGAGCAGTATACAGGAGGCTTCAAATGCGGCAACACAGCAATTTAGTGGTACTGATTT
G
CTTAATGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCA
CCA
CATTCTACAACCTCTGTTATACAGGGACATCAAATCATAGCAGTTCCCGACTCAGGATCAAAAGTAT
CC
CATTCTCCTGCCCTATCATCTGACGTTCGGTCTACAAATGGCACAGCAGAATGCAAAACTGTAAAGAG
G
CCAGCAGAGGATACTGATAGGGAAACAGTCGCAGGAATTCCAAATAAAGTAGGAGTTAGAATTGTTACA
ATC
AGTGACCCCAACAATGCTGGCTGCAGCGCAACAATGGTTGCTGTGCCAGCAGGAGCAGATCCAAGCA
CT
GTAGCTAAAGTAGCAATAGAAAGTGCTGTTCAGCAAAAGCAACAGCATCCACCAACATATGTACAGAA
T
GTGGTCCCGCAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAACAGTTCT
CAG
CCTTCTCCATTCAGTGGATCCAGTCAGCCTGGAGATCCAATGAGAAAACCTGGACAGAACTTCATGT
GT
CTGTGGCAGTCTTGTAAAAAGTGGTTTCAGACACCCTCACAGGTTTTCTACCATGCAGCAACTGAACA
T
GGAGGAAAAGATGTATATCCAGGGCAGTGTCTTTGGGAAGGTTGTGAGCCTTTTCAGCGACAGCGGTTT
TCT
TTTATTACCCACTTGCAGGATAAGCACTGTTCAAAGGATGCCCTACTTGCAGGATTAAAACAAGATG
AA
CCAGGACAAGCAGGAAGTCAGAAGTCTTCTACCAAGCAGCCAACTGTAGGGGGCACAAGCTCAACTCC
T
AGAGCACAAAAGGCCATTGTGAATCATCCCAGTGCTGCACTTATGGCTCTGAGGAGAGGATCAAGAAAC
CTT
GTCTTTCGAGATTTTACAGATGAAAAAGAGGGACCAATAACTAAACACATCCGACTAACAGCTGCCT
TA
ATATTAAAAAATATTGGTAAATATTCAGAATGTGGTCGCAGATTGTTAAAGAGACATGAAAATAACTT
A
TCAGTGCTAGCCATTAGTAACATGGAAGCTTCCTCCACCCTTGCCAAATGCCTTTATGAACTTAATTTT
ACA
GTTCAGAGTAAGGAACAAGAAAAAGACTCAGAAATGCTGCAGTGA


Translation (1835 aa):
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWG
E
IVEEFNFPRSCSNAAFALKQYYL
RYLEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPSSYNYQQHSVSD
Y
LRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVF
D
D
TLGSFSTVFGEEWKEKTDRDFVKFWKDIVDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGIND
I
EGQRVLQIAVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAE
LLLDPVDFK
T
THLMFHTVTKCLMSRDRFLKMR
GMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
V
LYMLTEMGDVACTKIAKVEKSI
DMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSEIRPQAIEQVQ
T
QTHVASAP
ASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGG
I
LTSTGFYKCL
RTVFPNHTVKRVEDSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDV
S
PAPSPA
GIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPV
T
VIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIP
Q
QSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
Q
SQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTV
V
QQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPAT
N
NQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQSNAGVG
Q
PASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQL
L
VGQQNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQG
N
ATQLIAPAGITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
R
KIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCSLISNGPSLEL
G
ENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPMEPQGTLD
I
TQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVS
P
HSTTSVIQGHQIIAVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVT
I
SDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQ
NTPMPPSPAVQVQGQPNSS
Q
PSPFSGSSQPGDPMRKPGQNFMCLWQSCK
KWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
S
FITHLQ
DKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRN
L
VFRDFT
DEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNF
T
VQSKEQEKDSEMLQ




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser