NCBI C++ ToolKit
Sparse_seg_.cpp
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1 /* $Id$
2  * ===========================================================================
3  *
4  * PUBLIC DOMAIN NOTICE
5  * National Center for Biotechnology Information
6  *
7  * This software/database is a "United States Government Work" under the
8  * terms of the United States Copyright Act. It was written as part of
9  * the author's official duties as a United States Government employee and
10  * thus cannot be copyrighted. This software/database is freely available
11  * to the public for use. The National Library of Medicine and the U.S.
12  * Government have not placed any restriction on its use or reproduction.
13  *
14  * Although all reasonable efforts have been taken to ensure the accuracy
15  * and reliability of the software and data, the NLM and the U.S.
16  * Government do not and cannot warrant the performance or results that
17  * may be obtained by using this software or data. The NLM and the U.S.
18  * Government disclaim all warranties, express or implied, including
19  * warranties of performance, merchantability or fitness for any particular
20  * purpose.
21  *
22  * Please cite the author in any work or product based on this material.
23  *
24  * ===========================================================================
25  *
26  * File Description:
27  * This code was generated by application DATATOOL
28  * using the following specifications:
29  * 'seqalign.asn'.
30  *
31  * ATTENTION:
32  * Don't edit or commit this file into CVS as this file will
33  * be overridden (by DATATOOL) without warning!
34  * ===========================================================================
35  */
36 
37 // standard includes
38 #include <ncbi_pch.hpp>
39 #include <serial/serialimpl.hpp>
40 
41 // generated includes
48 
49 BEGIN_objects_SCOPE // namespace ncbi::objects::
50 
51 
52 // generated classes
53 
55 {
56  m_Master_id.Reset();
57 }
58 
60 {
61  m_Master_id.Reset(&value);
62 }
63 
65 {
66  if ( !m_Master_id )
67  m_Master_id.Reset(new TMaster_id());
68  return (*m_Master_id);
69 }
70 
72 {
73  m_Rows.clear();
74  m_set_State[0] &= ~0xc;
75 }
76 
78 {
79  m_Row_scores.clear();
80  m_set_State[0] &= ~0x30;
81 }
82 
84 {
85  m_Ext.clear();
86  m_set_State[0] &= ~0xc0;
87 }
88 
90 {
92  ResetRows();
94  ResetExt();
95 }
96 
98 {
99  SET_CLASS_MODULE("NCBI-Seqalign");
100  ADD_NAMED_REF_MEMBER("master-id", m_Master_id, CSeq_id)->SetOptional();
101  ADD_NAMED_MEMBER("rows", m_Rows, STL_vector_set, (STL_CRef, (CLASS, (CSparse_align))))->SetSetFlag(MEMBER_PTR(m_set_State[0]));
102  ADD_NAMED_MEMBER("row-scores", m_Row_scores, STL_vector_set, (STL_CRef, (CLASS, (CScore))))->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional();
103  ADD_NAMED_MEMBER("ext", m_Ext, STL_vector_set, (STL_CRef, (CLASS, (CSparse_seg_ext))))->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional();
104  info->RandomOrder();
105  info->CodeVersion(22400);
106  info->DataSpec(ncbi::EDataSpec::eASN);
107 }
109 
110 // constructor
112 {
113  memset(m_set_State,0,sizeof(m_set_State));
114 }
115 
116 // destructor
118 {
119 }
120 
121 
122 
123 END_objects_SCOPE // namespace ncbi::objects::
124 
126 
User-defined methods of the data storage class.
User-defined methods of the data storage class.
User-defined methods of the data storage class.
BEGIN_NAMED_BASE_CLASS_INFO("Sparse-seg", CSparse_seg)
Definition: Sparse_seg_.cpp:97
User-defined methods of the data storage class.
Definition: Score.hpp:57
CSparse_seg_ext –.
#define MEMBER_PTR(MemberName)
Definition: serialimpl.hpp:284
#define ADD_NAMED_MEMBER(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)
Definition: serialimpl.hpp:342
#define ADD_NAMED_REF_MEMBER(MemberAlias, MemberName, ClassName)
Definition: serialimpl.hpp:357
#define END_CLASS_INFO
Definition: serialimpl.hpp:456
#define SET_CLASS_MODULE(ModuleName)
Definition: serialimpl.hpp:444
#define END_NCBI_SCOPE
End previously defined NCBI scope.
Definition: ncbistl.hpp:103
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
Definition: ncbistl.hpp:100
void ResetExt(void)
Reset Ext data member.
Definition: Sparse_seg_.cpp:83
virtual void Reset(void)
Reset the whole object.
Definition: Sparse_seg_.cpp:89
CRef< TMaster_id > m_Master_id
void ResetRows(void)
Reset Rows data member.
Definition: Sparse_seg_.cpp:71
vector< CRef< CScore > > m_Row_scores
virtual ~CSparse_seg_Base(void)
vector< CRef< CSparse_align > > m_Rows
void ResetRow_scores(void)
Reset Row_scores data member.
Definition: Sparse_seg_.cpp:77
Uint4 m_set_State[1]
void ResetMaster_id(void)
Reset Master_id data member.
Definition: Sparse_seg_.cpp:54
TMaster_id & SetMaster_id(void)
Assign a value to Master_id data member.
Definition: Sparse_seg_.cpp:64
vector< CRef< CSparse_seg_ext > > m_Ext
static MDB_envinfo info
Definition: mdb_load.c:37
const GenericPointer< typename T::ValueType > T2 value
Definition: pointer.h:1227
Modified on Sat May 18 11:39:58 2024 by modify_doxy.py rev. 669887