CAA Class Reference

Search Toolkit Book for CAA

#include "msms.hpp"
(Private to src/algo/ms/omssa.)

Public Member Functions
	CAA (void)
const char *const	GetMap (void) const
	return the map for translating AA char to AA number More...

Private Attributes
char	AAMap [256]

Detailed Description

Definition at line 143 of file msms.hpp.

Constructor & Destructor Documentation

CAA()

CAA::CAA

(

void

)

Definition at line 53 of file msms.cpp.

References AAMap, i, kNumUniqueAA, and UniqueAA.

Member Function Documentation

GetMap()

const char *const CAA::GetMap ( void  ) const

inline

return the map for translating AA char to AA number

Definition at line 160 of file msms.hpp.

References AAMap.

Referenced by CCleave::CalcMass(), CLadder::CreateLadder(), and CSearch< LEGACY, NHITS >::Search().

Member Data Documentation

AAMap

char CAA::AAMap[256]

private

Definition at line 153 of file msms.hpp.

Referenced by CAA(), and GetMap().

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The documentation for this class was generated from the following files:

• src/algo/ms/omssa/msms.hpp
• src/algo/ms/omssa/msms.cpp