CBamAlignIterator::ISpotIdDetector Class Reference

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ISpotIdDetector interface is used to detect spot id in case of incorrect flag combination. More...

#include <sra/readers/bam/bamread.hpp>

Inheritance diagram for CBamAlignIterator::ISpotIdDetector:

Public Member Functions
virtual	~ISpotIdDetector (void)
virtual void	AddSpotId (string &short_id, const CBamAlignIterator *iter)=0

Detailed Description

ISpotIdDetector interface is used to detect spot id in case of incorrect flag combination.

The actual type should be CObject derived.

Definition at line 720 of file bamread.hpp.

Constructor & Destructor Documentation

~ISpotIdDetector()

CBamAlignIterator::ISpotIdDetector::~ISpotIdDetector ( void  )

virtual

Definition at line 3206 of file bamread.cpp.

Member Function Documentation

AddSpotId()

virtual void CBamAlignIterator::ISpotIdDetector::AddSpotId ( string &  short_id, const CBamAlignIterator *  iter  )

pure virtual

Implemented in CDefaultSpotIdDetector.

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The documentation for this class was generated from the following files:

• include/sra/readers/bam/bamread.hpp
• src/sra/readers/bam/bamread.cpp