SCreateGeneModelParams Class Reference

Search Toolkit Book for SCreateGeneModelParams

#include <gui/packages/pkg_alignment/create_gene_model_params_panel.hpp>

Inheritance diagram for SCreateGeneModelParams:

Collaboration diagram for SCreateGeneModelParams:

Public Member Functions
	SCreateGeneModelParams ()
void	Init ()
IRegSettings interface implementation
virtual void	SetRegistryPath (const string &reg_path)
virtual void	LoadSettings ()
virtual void	SaveSettings () const
Public Member Functions inherited from IRegSettings
virtual	~IRegSettings ()

Public Attributes
string	m_RegPath
TConstScopedObjects	m_Alignments
bool	m_CreateGene
bool	m_CreateMrna
bool	m_CreateCds
bool	m_PropagateNcrnaFeats
bool	m_GroupByGeneId
bool	m_TranscribeMrna
bool	m_TranslateCds
bool	m_MergeResults
bool	m_PropagateLocalIds

Detailed Description

CCreateGeneModelParamsPanel class declaration

Definition at line 72 of file create_gene_model_params_panel.hpp.

Constructor & Destructor Documentation

SCreateGeneModelParams()

SCreateGeneModelParams::SCreateGeneModelParams

(

)

Definition at line 47 of file create_gene_model_params_panel.cpp.

References Init().

Member Function Documentation

Init()

void SCreateGeneModelParams::Init

(

void

)

Definition at line 52 of file create_gene_model_params_panel.cpp.

References m_CreateCds, m_CreateGene, m_CreateMrna, m_GroupByGeneId, m_MergeResults, m_PropagateLocalIds, m_PropagateNcrnaFeats, m_TranscribeMrna, and m_TranslateCds.

Referenced by CCreateGeneModelParamsPanel::RestoreDefaults(), and SCreateGeneModelParams().

LoadSettings()

void SCreateGeneModelParams::LoadSettings ( )

virtual

Implements IRegSettings.

Definition at line 70 of file create_gene_model_params_panel.cpp.

SaveSettings()

void SCreateGeneModelParams::SaveSettings ( ) const

virtual

Implements IRegSettings.

Definition at line 74 of file create_gene_model_params_panel.cpp.

SetRegistryPath()

void SCreateGeneModelParams::SetRegistryPath ( const string &  reg_path )

virtual

Implements IRegSettings.

Definition at line 65 of file create_gene_model_params_panel.cpp.

References m_RegPath.

Member Data Documentation

m_Alignments

TConstScopedObjects SCreateGeneModelParams::m_Alignments

Definition at line 89 of file create_gene_model_params_panel.hpp.

Referenced by CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelTask::x_GetCommand(), CCreateGeneModelToolManager::x_SelectCompatibleInputObjects(), and CCreateGeneModelToolManager::x_ValidateParams().

m_CreateCds

bool SCreateGeneModelParams::m_CreateCds

Definition at line 93 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), and CCreateGeneModelTask::x_GetCommand().

m_CreateGene

bool SCreateGeneModelParams::m_CreateGene

Definition at line 91 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), and CCreateGeneModelTask::x_GetCommand().

m_CreateMrna

bool SCreateGeneModelParams::m_CreateMrna

Definition at line 92 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), and CCreateGeneModelTask::x_GetCommand().

m_GroupByGeneId

bool SCreateGeneModelParams::m_GroupByGeneId

Definition at line 96 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), and CCreateGeneModelTask::x_GetCommand().

m_MergeResults

bool SCreateGeneModelParams::m_MergeResults

Definition at line 100 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), CCreateGeneModelTask::x_GetCommand(), and CCreateGeneModelTask::x_Run().

m_PropagateLocalIds

bool SCreateGeneModelParams::m_PropagateLocalIds

Definition at line 101 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), CCreateGeneModelTask::x_AssignIDsAndUpdateGenes(), and CCreateGeneModelTask::x_GetCommand().

m_PropagateNcrnaFeats

bool SCreateGeneModelParams::m_PropagateNcrnaFeats

Definition at line 94 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), and CCreateGeneModelTask::x_GetCommand().

m_RegPath

string SCreateGeneModelParams::m_RegPath

Definition at line 87 of file create_gene_model_params_panel.hpp.

Referenced by SetRegistryPath().

m_TranscribeMrna

bool SCreateGeneModelParams::m_TranscribeMrna

Definition at line 97 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), and CCreateGeneModelTask::x_GetCommand().

m_TranslateCds

bool SCreateGeneModelParams::m_TranslateCds

Definition at line 98 of file create_gene_model_params_panel.hpp.

Referenced by Init(), CCreateGeneModelParamsPanel::TransferDataFromWindow(), CCreateGeneModelParamsPanel::TransferDataToWindow(), and CCreateGeneModelTask::x_GetCommand().

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The documentation for this class was generated from the following files:

• include/gui/packages/pkg_alignment/create_gene_model_params_panel.hpp
• src/gui/packages/pkg_alignment/create_gene_model_params_panel.cpp