msmerge.hpp File Reference

#include <iostream>
#include <deque>
#include <map>
#include <corelib/ncbistr.hpp>
#include <corelib/ncbiexpt.hpp>
#include <objects/omssa/MSSearch.hpp>
#include "msms.hpp"

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Classes
class	COMSSASearch

Typedefs
typedef std::set< int >	TOid
	type that hold a list of oids More...

Functions
CObjectOStream *	SetUpOutputFile (CObjectOStream *os, ESerialDataFormat DataFormat)
	sets up output file based on DataFormat in particular, initializes xml stream appropriately More...

Typedef Documentation

TOid

typedef std::set<int> TOid

type that hold a list of oids

Definition at line 52 of file msmerge.hpp.

Function Documentation

SetUpOutputFile()

CObjectOStream* SetUpOutputFile	(	CObjectOStream *	os,
		ESerialDataFormat	DataFormat
	)

sets up output file based on DataFormat in particular, initializes xml stream appropriately

Parameters

os	output stream
DataFormat	format of file type

Returns

output stream

Definition at line 302 of file msmerge.cpp.

References eSerial_Xml, CObjectOStreamXml::SetReferenceSchema(), and CObjectOStream::SetWriteNamedIntegersByValue().

Referenced by COMSSAMerge::Run().