1 #ifndef PKG_ALIGNMENT___SPLIGN_PARAMS__HPP
2 #define PKG_ALIGNMENT___SPLIGN_PARAMS__HPP
40 #include <wx/string.h>
IRegSettings An interface for objects that save / restore settings using CGuiRegistry.
static unsigned char depth[2 *(256+1+29)+1]
void Copy(const CSplignParams &data)
void SetMinCompIdentity(double value)
bool operator==(const CSplignParams &data) const
double GetCompPenalty() const
void SetMaxGenomicExtent(long value)
long GetMaxGenomicExtent() const
void operator=(const CSplignParams &data)
void SetCompPenalty(double value)
virtual void LoadSettings()
bool GetPolyADetect() const
void SetCDNAStrand(int value)
void SetEndGapDetect(bool value)
virtual void DebugDump(CDebugDumpContext ddc, unsigned int depth) const
double GetMinExonIdentity() const
void SetMinExonIdentity(double value)
bool GetEndGapDetect() const
virtual void SaveSettings() const
void SetDiscType(int value)
long GetMaxIntron() const
void SetMaxIntron(long value)
void SetPolyADetect(bool value)
double GetMinCompIdentity() const
virtual void SetRegistryPath(const string &path)
IRegSettings.
int GetCDNAStrand() const
#define END_NCBI_SCOPE
End previously defined NCBI scope.
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
const GenericPointer< typename T::ValueType > T2 value
Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.