Search Toolkit Book for CMultiAligner::SColumn
Column in an alignment used for combining result from multiple alignment and pair-wise in-cluster alignments. More...
Collaboration diagram for CMultiAligner::SColumn:
Public Member Functions | |
| SColumn (void) | |
Public Attributes | |
| bool | insert |
| Is the column an insertion from in-cluster alignment. More... | |
| vector< int > | letters |
| Indices of letters in this column for regular column: index of a letter in input sequence (n-th letter) for inserted column: index of a letter in in-cluster alignment. More... | |
| int | number |
| number of letters in range (inserted column only) More... | |
| int | cluster |
| cluster index (inserted column only) More... | |
Detailed Description
Column in an alignment used for combining result from multiple alignment and pair-wise in-cluster alignments.
Definition at line 531 of file cobalt.hpp.
Constructor & Destructor Documentation
◆ SColumn()
|
inline |
Definition at line 547 of file cobalt.hpp.
Member Data Documentation
◆ cluster
| int CMultiAligner::SColumn::cluster |
cluster index (inserted column only)
Definition at line 545 of file cobalt.hpp.
◆ insert
| bool CMultiAligner::SColumn::insert |
Is the column an insertion from in-cluster alignment.
Definition at line 533 of file cobalt.hpp.
◆ letters
| vector<int> CMultiAligner::SColumn::letters |
Indices of letters in this column for regular column: index of a letter in input sequence (n-th letter) for inserted column: index of a letter in in-cluster alignment.
Definition at line 539 of file cobalt.hpp.
◆ number
| int CMultiAligner::SColumn::number |
number of letters in range (inserted column only)
Definition at line 542 of file cobalt.hpp.
The documentation for this struct was generated from the following file:
- include/algo/cobalt/cobalt.hpp
