NCBI C++ ToolKit
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PSIDiagnosticsRequest Struct Reference

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Structure to allow requesting various diagnostics data to be collected by PSSM engine. More...

#include <algo/blast/core/blast_psi.h>

Public Attributes

Boolean information_content
 request information content More...
 
Boolean residue_frequencies
 request observed residue frequencies More...
 
Boolean weighted_residue_frequencies
 request observed weighted residue frequencies More...
 
Boolean frequency_ratios
 request frequency ratios More...
 
Boolean gapless_column_weights
 request gapless column weights More...
 
Boolean sigma
 request sigma More...
 
Boolean interval_sizes
 request interval sizes More...
 
Boolean num_matching_seqs
 request number of matching sequences More...
 
Boolean independent_observations
 request number of independent observations More...
 

Detailed Description

Structure to allow requesting various diagnostics data to be collected by PSSM engine.

Definition at line 181 of file blast_psi.h.

Member Data Documentation

◆ frequency_ratios

Boolean PSIDiagnosticsRequest::frequency_ratios

◆ gapless_column_weights

Boolean PSIDiagnosticsRequest::gapless_column_weights

◆ independent_observations

Boolean PSIDiagnosticsRequest::independent_observations

request number of independent observations

Definition at line 194 of file blast_psi.h.

Referenced by BOOST_AUTO_TEST_CASE(), CdPssmInput::CdPssmInput(), and PSIDiagnosticsResponseNew().

◆ information_content

Boolean PSIDiagnosticsRequest::information_content

◆ interval_sizes

Boolean PSIDiagnosticsRequest::interval_sizes

request interval sizes

Definition at line 191 of file blast_psi.h.

Referenced by BOOST_AUTO_TEST_CASE(), PSIDiagnosticsRequestNewEx(), and PSIDiagnosticsResponseNew().

◆ num_matching_seqs

Boolean PSIDiagnosticsRequest::num_matching_seqs

request number of matching sequences

Definition at line 192 of file blast_psi.h.

Referenced by BOOST_AUTO_TEST_CASE(), PSIDiagnosticsRequestNewEx(), and PSIDiagnosticsResponseNew().

◆ residue_frequencies

Boolean PSIDiagnosticsRequest::residue_frequencies

◆ sigma

Boolean PSIDiagnosticsRequest::sigma

request sigma

Definition at line 190 of file blast_psi.h.

Referenced by BOOST_AUTO_TEST_CASE(), PSIDiagnosticsRequestNewEx(), and PSIDiagnosticsResponseNew().

◆ weighted_residue_frequencies

Boolean PSIDiagnosticsRequest::weighted_residue_frequencies

The documentation for this struct was generated from the following file:
Modified on Wed Feb 21 09:54:47 2024 by modify_doxy.py rev. 669887