NCBI C++ ToolKit
Classes | Enumerations | Functions
vcf_reader.hpp File Reference
#include <corelib/ncbistd.hpp>
#include <objects/seq/Seq_annot.hpp>
#include <objects/seq/Annotdesc.hpp>
#include <objtools/readers/reader_base.hpp>
#include <objtools/readers/message_listener.hpp>
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Classes

class  CVcfInfoSpec
 
class  CVcfFilterSpec
 
class  CVcfFormatSpec
 
class  CVcfReader
 

Enumerations

enum  ESpecType {
  eType_Integer , eType_Float , eType_Flag , eType_Character ,
  eType_String
}
 
enum  ESpecNumber { eNumber_CountAlleles = -1 , eNumber_CountGenotypes = -2 , eNumber_CountUnknown = -3 , eNumber_CountAllAlleles = -4 }
 

Functions

ESpecType SpecType (const string &)
 
ESpecNumber SpecNumber (const string &)
 

Enumeration Type Documentation

◆ ESpecNumber

Enumerator
eNumber_CountAlleles 
eNumber_CountGenotypes 
eNumber_CountUnknown 
eNumber_CountAllAlleles 

Definition at line 64 of file vcf_reader.hpp.

◆ ESpecType

enum ESpecType
Enumerator
eType_Integer 
eType_Float 
eType_Flag 
eType_Character 
eType_String 

Definition at line 52 of file vcf_reader.hpp.

Function Documentation

◆ SpecNumber()

ESpecNumber SpecNumber ( const string specnumber)

◆ SpecType()

ESpecType SpecType ( const string spectype)
Modified on Fri Mar 01 10:07:15 2024 by modify_doxy.py rev. 669887