xutils.h File Reference

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Typedefs
typedef std::list< CRef< objects::CSeq_loc > >	TSeqLocList
typedef std::list< CRef< objects::CDelta_seq > >	TDeltaList

Functions
void	XGappedSeqLocsToDeltaSeqs (const TSeqLocList &locs, TDeltaList &deltas)
int	XDateCheck (const objects::CDate_std &date)

Typedef Documentation

TDeltaList

typedef std::list<CRef<objects::CDelta_seq> > TDeltaList

Definition at line 6 of file xutils.h.

TSeqLocList

typedef std::list<CRef<objects::CSeq_loc> > TSeqLocList

Definition at line 5 of file xutils.h.

Function Documentation

XDateCheck()

int XDateCheck

(

const objects::CDate_std &

date

)

XGappedSeqLocsToDeltaSeqs()

void XGappedSeqLocsToDeltaSeqs	(	const TSeqLocList &	locs,
		TDeltaList &	deltas
	)

Definition at line 91 of file xutils.cpp.

References delta(), CSeq_interval_Base::GetFrom(), CSeq_interval_Base::GetTo(), tag, unkseqlitdbtag, and XISAGappedSeqLoc().

Referenced by GetEmblInstContig(), GetGenBankInstContig(), and XMLGetInstContig().