2CPY


Conserved Protein Domain Family
RRM4_RBM12
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cd12749: RRM4_RBM12 (this model, PSSM-Id:241193 is obsolete and has been replaced by 410143)
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RNA recognition motif 4 in RNA-binding protein 12 (RBM12) and similar proteins
This subgroup corresponds to the RRM4 of RBM12, also termed SH3/WW domain anchor protein in the nucleus (SWAN), which is ubiquitously expressed. It contains five distinct RNA binding motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), two proline-rich regions, and several putative transmembrane domains. The biological role of RBM12 remains unclear.
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Statistics
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PSSM-Id: 241193
Aligned: 4 rows
Threshold Bit Score: 168.869
Created: 14-Sep-2011
Updated: 1-Feb-2013
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2CPY_A        17 CAHITNIPfSITKMDVLQFLEGip--vDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTlE 94  human
NP_996869    546 CAHISNIPyNITKMEILQFLEGla--vEENSVQILVDNNGQGLGQALVQFKAEDDARKAERLHRKKLNGRDVVLRLITvE 623 chicken
NP_001079993 546 WGHLSNLPySIMRKDISHFFISegfaiDENFVQLLTDNNGQCIGQALVQFRSEDDARKSERLHRKKLNGRDVFLHIVNaE 625 African clawed ...
NP_001003856 535 CAHITNIPyNVTKKDVRLFLDGie--lFEESLKVLVDSNGNGLGQAIVQFKSDEDALKAERLHRQKLNGRDAFVHLVTfD 612 zebrafish

2CPY_A        95 DMREIEKNPP 104 human
NP_996869    624 EMRDIERNPP 633 chicken
NP_001079993 626 ERNDIELNPP 635 African clawed frog
NP_001003856 613 QMKEVERNPP 622 zebrafish
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