1WXP


Conserved Protein Domain Family
Death_NMPP84

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cd08318: Death_NMPP84 
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Death domain of Nuclear Matrix Protein P84
Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Statistics
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PSSM-Id: 260030
Aligned: 6 rows
Threshold Bit Score: 140.349
Created: 13-Nov-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WXP_A        12 RDKPVTGEQIEVFANKLGEQWKILAPYLEM-KDSEIRQIECDSeDMKMRAKQLLVAWQDQEGvHATPENLINALNKSGLs 90  human
AAH82664     567 QKLSMTSEQIESFANKLGEHWKTLAPYLDM-KDLDIKMIESDTeDAKMRAKLLLLGWQEREGgQANIEILISALNSAGLn 645 African clawed ...
AAH54938     568 QSKAVTNSQMDEIAAKLGSQWKTLADHLEM-SDKEIRVIESDSeDVDLQAKMLLVAWQDREGsQATMESLVTALNAAGFn 646 zebrafish
XP_002609864 469 GAPPLTQEHIDVLAEKLGADWKKLAPHLDF-KGAEITAIEGDSnEMNTQATQLLVTWQDREGpRATVDIIMTALEDAGMq 547 Florida lancelet
EMP31148     460 RDKPMTGEQIESFANKLGEQWKTLAPYLEM-KDSDIRQIESDSeDVKMRAKQLLVAWQDQEGiHATPENLITAVNKAGLs 538 green seaturtle
CBY21297     556 SDGKVTSDQIDKLSTELGEKWKDLAEELRHiTSKDIKTFEEDAeDDAVRARIALCTWQDKNGaEATSVVLMETLRAIGLd 635 Oikopleura dioica
1WXP_A        91 DLAESLT 97  human
AAH82664     646 ELAENLT 652 African clawed frog
AAH54938     647 NIADNLS 653 zebrafish
XP_002609864 548 EISDVVF 554 Florida lancelet
EMP31148     539 DLAESLT 545 green seaturtle
CBY21297     636 EIANNVF 642 Oikopleura dioica
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