2XKX


Conserved Protein Domain Family
PDZ_assoc
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pfam10600: PDZ_assoc (this model, PSSM-Id:287558 is obsolete and has been replaced by 463164)
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PDZ-associated domain of NMDA receptors
This domain is found in higher eukaryotes between the second and third PDZ domains, pfam00595, of glutamate receptor like proteins. Its exact function is not known.
Links
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Statistics
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PSSM-Id: 287558
Aligned: 25 rows
Threshold Bit Score: 96.6689
Created: 15-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2XKX_A       242 KPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYpt-amTPtSPRRYSPVAKDLLGEED-IPREPR 309 Norway rat
XP_011481840 275 KPTQVYLSDSYGLSNVKRSFSPTMESLTSSPIIFRTPDfrsdlCSaSPTSHSHLNMRLQDEDE-ISRPPE 343 Japanese medaka
EDK97754     371 KPTSMYINDGYAPPDITNSSSQSVDNHVSPSSCLGQ-------TPtSPARYSPISKAVLGDDE-ITREPR 432 house mouse
NP_001012378 335 KPTSVYLSDPYGPPDITHSFSPAMENHISSPGNNGTLEyksslPPiSPGRYSPLPKHLLGEED-INRNPs 403 zebrafish
XP_005450564 411 KPTSVYLSDPYGPPDNMQSFSPPMKNHVSSPINTGSLHyksdlPVaSPRSYSPLSAHFLREED-VNRPPE 479 Nile tilapia
XP_005165971 213 KPTSVFMNDSYAPPDVTSSYSQHMENHISTQSYLSQPL-----TPaTPSRYSPVSKGMLGDDE-ITREPR 276 zebrafish
XP_006637478 285 KPTSVFMNDSFAPPDITNSYSQHMENHISTPSYLGHVL-----PPtTPGRYSPISKGMLGDEE-MTREPR 348 spotted gar
XP_011484636 294 KPNTVFMNDGFAPPDLTNSYSQHMENHISPPNFVSHQLq----PRgSSGCYSPTPMSPLADDDgVTREPR 359 Japanese medaka
XP_005813518 225 KPNSVFMNDSFAPPDLTNSYTQHMENHISPPSFLGQAVp----PPaSSGRYSPTPKGILGEDD-VTREPR 289 southern platyfish
XP_005163739 213 KPNSVFMNDSFAPPDITNSYSQHMENHISPPSYLSQPL-----PPvHSGRFSPTPKTTVGDDD-VTREPR 276 zebrafish
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