Conserved Protein Domain Family
DND1_DSRM

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pfam14709: DND1_DSRM (this model, PSSM-Id:291380 is obsolete and has been replaced by 405408)
double strand RNA binding domain from DEAD END PROTEIN 1
A C-terminal domain in human dead end protein 1 (DND1_HUMAN) homologous to double strand RNA binding domains (PF00035, PF00333)
Statistics
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PSSM-Id: 291380
Aligned: 16 rows
Threshold Bit Score: 83.1587
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q28I69       276 LSAVACLNILCLKMKLGYPVFLIK-LfS--VTSFGWLRFWYQVVIPRYPTpFCGYSWIIGENlELNEKYDNAREVVAVKI 352 western clawed ...
Q4T4A7       266 TSPTMLLDYLCRKNGFGRPHCEIS-ChH--AEPDGYLHFSYKVFNRGMNT-LEGVIMILPGV-TAASTMEEARRAVAQQV 340 spotted green p...
Q7T1H5       323 LDAVSHLQWMCEVNRLGSPQYEVH-FhH--AAPDGFLYFAFKVLIPGLPLpLYGFVQILPGT-SARAMKSEVYRAAAEQV 398 zebrafish
XP_002600811 435 KSAPQMLEEMCQKNQWGSPVYSLH-S-T--MGPGERQLFLYKVTVPALASqYPSA-QPFQPT-KLAPSVEEAKSVAAEFV 508 Florida lancelet
XP_002600810 394 KSAVQVLEELCRKNQWGNPQYTLH-S-ThtSGQNFRQLFLYKINVPGYSSgSPGPNTPFTPN-KLAPNPDDAKQYAAEYV 470 Florida lancelet
NP_001157988 286 vSPVLLLRKLSEASGWGDPHYEMLfS-H--AGPDGFLYFTYKVHVPGAPTtFRGFVMILPGH-CTSTMLEEARRAAAQQV 361 Japanese medaka
XP_001638610 331 KKSQEILEDVCQKNQWGSPVYTLH-S-T--LGPQEVQLFLYKVSIPGLATqY-------QPP-KLCRTVEEAKNYAAEHT 398 starlet sea ane...
EDL76318     238 QGARAALQQLCQRMKLGCPVFLTK-ClG--TGPAGWHRFWYQVVIPGHPVpFSGLIWVVLTS-DWQDGHEVAKDAVSAQL 313 Norway rat
XP_002994689 157 AFTRQTLNDICLQRQWPMPQYRLL-S-E--SGPAHAKRFTYTVRVNTRERgWT----DECEG-QAMPSMKKAKDSAALVL 227 Selaginella moe...
CBY36802     458 LNSFQLLEEICKLNSLGSPVYQLHsC-Q--VGAK----VLYLCHITLANGsTLNQMVTRSGC-RWSSTPEEAQSLAAEGI 529 Oikopleura dioica
Q28I69       353 LSALG 357 western clawed frog
Q4T4A7       341 LCKLF 345 spotted green pufferfish
Q7T1H5       399 IQTLC 403 zebrafish
XP_002600811 509 LNQLG 513 Florida lancelet
XP_002600810 471 LMQLG 475 Florida lancelet
NP_001157988 362 LQKLC 366 Japanese medaka
XP_001638610 399 LQQLG 403 starlet sea anemone
EDL76318     314 LETLS 318 Norway rat
XP_002994689 228 LEVLK 232 Selaginella moellendorffii
CBY36802     530 LALLG 534 Oikopleura dioica
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