2DIG


Conserved Protein Domain Family
LBR_tudor

?
pfam09465: LBR_tudor (this model, PSSM-Id:370513 is obsolete and has been replaced by 462808)
Click on image for an interactive view with Cn3D
Lamin-B receptor of TUDOR domain
The Lamin-B receptor, found on the TUDOR domain pfam00567, is a chromatin and lamin binding protein in the inner nuclear membrane. It is one of the integral inner Nuclear Envelope membrane proteins responsible for targeting nuclear membranes to chromatin, being a downstream effector of Ran, a small Ras-like nuclear GTPase which regulates NE assembly. Lamin-B receptor interacts with Importin beta, a Ran-binding protein, thereby directly contributing to the fusion of membrane vesicles and the formation of the NE.
Statistics
?
PSSM-Id: 370513
Aligned: 11 rows
Threshold Bit Score: 94.8079
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2DIG_A         8 MPSR-KFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIK 62  human
4_pfamImport   1 MPSV-KYQKGELVMGRWPGSNLYYQVKVLSFDVKEQLYTVIYKDGTELELKEQDIK 55 
XP_006002534   1 MPNK-KFNIGEVVMGRWPGSSLYYEVKILSYEEKDQLYIVKYKDGTELELKENDIK 55  coelacanth
ELK32134       1 MPSR-KFADGEVVRGRWPGSSLYYEVEVLSHDSKSQLYTVKYKDGTELELKESDIK 55  Myotis davidii
XP_015199756   1 MPSS-KFQSGEMVMGRWPGSSLYYEVKVMNFDAPTELYTVKYKDGTELELKESDIR 55  spotted gar
CAJ15494       1 MPPA-RFQIGDTVMGRWPGSNLYYEVKVMSFDNKTRLYTVIYKDGTELELKESDIT 55  zebrafish
XP_008396802  43 MPSL-KYQAGDKVMGRWPGSSLYYEVKVLGYDAKSRLYTVIYKDGTELELKEQDIm 97  guppy
ETE63671       1 MARR-KFADEEVVMGRWPGSVLYYEVKVISYDEHTRLYTVKYEDGTELNLKENDMR 55  king cobra
NP_001120539   1 MPAQ-KYENGETVMARWPGSSLYYEVQVVEFNTQKQEYKVLYKDGTDLDLQEGELK 55  tropical clawed frog
XP_003723672   1 MPSTtSFGDGDAVMSRWPGSTLWFKSKILRVSEDG--YKVQFEDGTEEEIPLTDVK 54  purple sea urchin
CAG31779       1 MPNR-KYADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKDGTELALKESDIR 55  chicken
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap