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1N86:
Crystal structure of human D-dimer from cross-linked fibrin complexed with GPR and GHRPLDK peptide ligands
PDB ID:
1N86
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MMDB ID:
21849
PDB Deposition Date:
2002/11/19
Updated in MMDB:
2012/12
Experimental Method:
x-ray diffraction
Resolution:
3.2 Å
Source Organism:
synthetic construct
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Taxonomy
Molecule
synthetic construct
G, H, I, J
Homo sapiens
A, B, C, D, E, F
Similar Structures:
VAST+
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Biological Unit for 1N86: decameric; determined by author
Molecular Components in 1N86
Label
Count
Molecule
Proteins (10 molecules)
A
D
2
Fibrin Alpha/alpha-e Chain
B
E
2
Fibrin Beta Chain
C
F
2
Fibrin Gamma Chain
G
H
2
Fibrin Alpha Chain Peptide Ligand Fragment Gly-pro-arg
I
J
2
Fibrin Beta Chain Peptide Ligand Fragment Gly-his-arg-pro-leu-asp-lys
Chemicals and Non-standard biopolymers (9 molecules)
1
4
2-acetamido-2-deoxy-alpha-D-glucopyranose
2
1
alpha-D-mannopyranose
3
4
CALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303