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1R9T:
RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE
PDB ID:
1R9T
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MMDB ID:
234558
PDB Deposition Date:
2003/10/30
Updated in MMDB:
2023/08
Experimental Method:
x-ray diffraction
Resolution:
3.5 Å
Source Organism:
synthetic construct
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Taxonomy
Molecule
synthetic construct
R, T, N
Saccharomyces cerevisiae
A, B, C, E, F, H, I, J, K, L
Similar Structures:
VAST+
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Biological Unit for 1R9T: tridecameric; determined by author
Molecular Components in 1R9T
Label
Count
Molecule
Proteins (10 molecules)
A
1
DNA-directed RNA Polymerase II Largest Subunit
B
1
DNA-directed RNA Polymerase II 140 KDA Polypeptide
C
1
DNA-directed RNA Polymerase II 45 KDA Polypeptide
E
1
DNA-directed RNA Polymerases I, II, and III 27 KDA Polypeptide
F
1
DNA-directed RNA Polymerases I, II, and III 23 KDA Polypeptide
H
1
DNA-directed RNA Polymerases I, II, and III 14.5 KDA Polypeptide
I
1
DNA-directed RNA Polymerase II 14.2 KDA Polypeptide
J
1
DNA-directed RNA Polymerases I, II, and III 8.3 KDA Polypeptide
K
1
DNA-directed RNA Polymerase II 13.6 KDA Polypeptide
L
1
DNA-directed RNA Polymerases I, II, and III 7.7 KDA Polypeptide
Nucleotides(3 molecules)
R
1
RNA Strand
T
1
DNA Template Strand
N
1
DNA Nontemplate Strand
Chemicals and Non-standard biopolymers (11 molecules)
1
8
ZINC ION
2
2
MAGNESIUM ION
3
1
ADENOSINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303