2FD6: Structure of Human Urokinase Plasminogen Activator in Complex with Urokinase Receptor and an anti-upar antibody at 1.9 A

PDB ID: 2FD6Download
MMDB ID: 37726
PDB Deposition Date: 2005/12/13
Updated in MMDB: 2007/10
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Mus musculus▼
Similar Structures:
Biological Unit for 2FD6: tetrameric; determined by author and by software (PISA)
Molecular Components in 2FD6
Label Count Molecule
Proteins (4 molecules)
1
Urokinase-type Plasminogen Activator
Molecule annotation
1
L Chain of FAB of Atn-615 Anti-upar Antibody
Molecule annotation
1
H Chain of FAB of Atn-615 Anti-upar Antibody
Molecule annotation
1
Urokinase Plasminogen Activator Surface Receptor
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
3
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
alpha-L-fucopyranosealpha-L-fucopyranose
3
1
SULFATE IONSULFATE ION
4
3
2-ETHOXYETHANOL2-ETHOXYETHANOL
5
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
1
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
7
1
2-acetamido-2-deoxy-alpha-D-glucopyranose2-acetamido-2-deoxy-alpha-D-glucopyranose
8
1
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303