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2OYI:
Crystal Structure of Fragment D of gammaD298,301A Fibrinogen with the Peptide Ligand Gly-Pro-Arg-Pro-Amide
PDB ID:
2OYI
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MMDB ID:
46471
PDB Deposition Date:
2007/2/22
Updated in MMDB:
2024/11
Experimental Method:
x-ray diffraction
Resolution:
2.7 Å
Source Organism:
synthetic construct
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Taxonomy
Molecule
synthetic construct
G, H, I, J
Homo sapiens
A, B, C, D, E, F
Similar Structures:
VAST+
Download sequence data
Biological Unit for 2OYI: pentameric; determined by author and by software (PISA)
Molecular Components in 2OYI
Label
Count
Molecule
Proteins (5 molecules)
A
1
Fibrinogen Alpha Chain
B
1
Fibrinogen Beta Chain
C
1
Fibrinogen Gamma Chain
G
H
2
Gprp Peptide
Chemicals and Non-standard biopolymers (6 molecules)
1
3
2-acetamido-2-deoxy-beta-D-glucopyranose
(Link to PubChem not yet available)
2
1
alpha-L-fucopyranose
(Link to PubChem not yet available)
3
2
CALCIUM ION
(Link to PubChem not yet available)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303