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2VDP:
Integrin AlphaIIbBeta3 Headpiece Bound to Fibrinogen Gamma chain peptide,LGGAKQAGDV
PDB ID:
2VDP
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MMDB ID:
66416
PDB Deposition Date:
2007/10/10
Updated in MMDB:
2012/12
Experimental Method:
x-ray diffraction
Resolution:
2.8 Å
Source Organism:
Mus musculus
▼
Taxonomy
Molecule
Mus musculus
H, L
Homo sapiens
A, B, C
Similar Structures:
VAST+
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Biological Unit for 2VDP: pentameric; determined by author and by software (PQS)
Molecular Components in 2VDP
Label
Count
Molecule
Proteins (5 molecules)
A
1
Integrin Alpha-iib
B
1
Integrin Beta-3
C
1
Fibrinogen
H
1
Monoclonal Antibody 10e5 Heavy Chain
L
1
Monoclonal Antibody 10e5 Light Chain
Chemicals and Non-standard biopolymers (24 molecules)
1
7
2-acetamido-2-deoxy-beta-D-glucopyranose
2
8
alpha-D-mannopyranose
3
2
GLYCEROL
4
6
CALCIUM ION
5
1
MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303